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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948376.1_cds_XP_016489661.1_80158
CDS Infomation

[gene=LOC107809524] [db_xref=GeneID:107809524] [protein=isocitrate dehydrogenase [NADP]-like isoform X2] [protein_id=XP_016489661.1] [location=join(4797..5058,7505..7548,7655..7764,7930..7967,8171..8248,8342..8395,8480..8581,8763..8848,8944..9047,9172..9240,9332..9447,9611..9645,9866..10008,10269..10391,10490..10580)] [gbkey=CDS]
Sequence

ATGTCCTCTTTTTTTGTTTTTATGTCAATTTCGCACTTACCTTCAAAACTTCGACCTTTC
CAAAGTACACTGTCTTCTCAATTTCCTAACTTCAATTCAAACTTCTTTGGTCGACGAACC
TTTCTTTATCAAACTCCATTTATACCCCTTTATTTCCATACTTATCATATATCACCAGAA
TTTTCAGTTGTTAATCTCAATTCTTTACAAGAAATGGCTTTTCAAAAGATCAAAGTGGTT
AATCCCATAGTTGAAATGGACGGAGATGAAATGACGCGTGTAATTTGGAAATTAATTAAG
GACAAGCTCATCTTTCCCTTTGTGGAGTTGGATATAAAATACTTCGATCTTGGTCTTCCT
CACCGTGATGCCACAGATGACAAGGTTACAATTGAAAGTGCTGAGGCTACTTTGAAGTAT
AATGTAGCAATTAAGTGCGCGACCATCACTCCAGATGAGGGCCGTATGAAGGAGTTTAAC
TTGAAGCATATGTGGAAGAGCCCAAACGGGACAATTAGGAACATTCTGAACGGTACTGTG
TTCAGGGAACCAATCCTCTGCAAAAACATTCCCCGACTTGTCCCCGGTTGGTCAAAACCA
ATATGCATTGGCAGACATGCTTTTGGTGATCAATATCGAGCTACTGATACAGTAATTCAA
GGACCTGGAAAACTAAAACTAGTATTTGAAGGGAAGGATGAAAAGACCGAGTTCGAGGTT
TACAACTTCACTGGTGCTGGTGGAGTAGCTCTGTCCATGTACAACACAGATGAGTCTATT
CGCTCTTTTGCTGAAGCTTCTATGAACATGGCGTACCAAAAGAAATGGCCGCTCTATCTT
AGCACAAAGAATACCATCCTTAAGAAATATGATGGAAGATTCAAGGACATATTCCAGGAA
GTTTATGAGTCAAATTGGAAGTTAAAGTTTGAGGAAGCTGGAATCTGGTATGAACATCGC
CTCATTGATGATATGGTTGCTTATGCTTTAAAAAGTGATGGTGGTTATGTATGGGCGTGC
AAAAACTATGACGGGGATGTACAGAGTGATTTCTTAGCACAAGGATTTGGATCCCTTGGA
TTGATGACATCGATTCTGATATGTCCAGATGGAAAGACCATAGAGTCAGAAGCAGCCCAT
GGAACTGTGACGCGGCACTACAGGGTTCATCAAAAAGGAGGTGAAACCAGCACGAACAGC
ATTGCCTCGATTTTTGCTTGGACTCGTGGACTTGCACACAGGGCAAAGTTGGACAACAAT
GCTGCACTCTTGGATTTTACCAAGAAATTAGAGGCAGCTTGCATCGGTGCGGTGGAGAAT
GGAAAAATGACCAAAGATTTAGCACTTATCGTCCACGGATCCAAGGTTGCTAGACATCAA
TATGTGAACACTGAAGAGTTCATCGACGCTGTGGCTGATGAGCTGAAAGCTAGACTTCTG
AAAGCAAAGATTTAA

Peptide Sequence

PEP ID

XP_016489661.1
PEP Infomation

PREDICTED: isocitrate dehydrogenase [NADP]-like isoform X2 [Nicotiana tabacum]
Sequence

MSSFFVFMSISHLPSKLRPFQSTLSSQFPNFNSNFFGRRTFLYQTPFIPLYFHTYHISPE
FSVVNLNSLQEMAFQKIKVVNPIVEMDGDEMTRVIWKLIKDKLIFPFVELDIKYFDLGLP
HRDATDDKVTIESAEATLKYNVAIKCATITPDEGRMKEFNLKHMWKSPNGTIRNILNGTV
FREPILCKNIPRLVPGWSKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKTEFEV
YNFTGAGGVALSMYNTDESIRSFAEASMNMAYQKKWPLYLSTKNTILKKYDGRFKDIFQE
VYESNWKLKFEEAGIWYEHRLIDDMVAYALKSDGGYVWACKNYDGDVQSDFLAQGFGSLG
LMTSILICPDGKTIESEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLAHRAKLDNN
AALLDFTKKLEAACIGAVENGKMTKDLALIVHGSKVARHQYVNTEEFIDAVADELKARLL
KAKI

Transcript Sequence

Gene sequence data has not been registered.